ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4FVL3_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q4FVL3_nD2

Q4FVL3_nD2

UID: 004257682

AlphaFold

Range: 256-295,346-380
AlphaFold: AF-Q4FVL3
UniProt: Q4FVL3 (all domains)
Gene: truB

Protein: tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)

3D Structure

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Related Domains

Browse other domains in TruB-C_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyTruB-C_2(1.1.9.11)

Pfam Families

PF09157TruB-C_2

Pseudouridine synthase II TruB, C-terminal

ClanCL0178PUA

External Links

AlphaFold DB: Q4FVL3 UniProt: Q4FVL3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 256-295,346-380