ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8IIK4_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8IIK4_nD1

Q8IIK4_nD1

UID: 004258214

AlphaFold

Range: 1-219
AlphaFold: AF-Q8IIK4
UniProt: Q8IIK4 (all domains)
Gene: PDX2

Protein: Pyridoxal 5'-phosphate synthase subunit PDX2 (PfPDX2) (EC 4.3.3.6) (Pyridoxal 5'-phosphate synthase glutaminase subunit) (EC 3.5.1.2)

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupClass I glutamine amidotransferase-like(2007.1.1)

FFamilySNO(2007.1.1.2)

Pfam Families

SNO glutamine amidotransferase family

ClanCL0014Glutaminase_I

External Links

AlphaFold DB: Q8IIK4 UniProt: Q8IIK4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-219