ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3p1zJ1 - ECOD Domain | ECOD

ECOD/Domains/e3p1zJ1

e3p1zJ1

UID: 000426077

PDB

Range: J:7-89
PDB: 3P1Z chain J(all domains)
UniProt: Q9YBF1 (all domains)
Gene: endA

Molecule: tRNA-splicing endonuclease (EC 4.6.1.16) (tRNA-intron endonuclease)

3D Structure

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Related Domains

Browse other domains in tRNA_int_endo_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-grouptRNA-intron endonuclease N-terminal domain-like(242.2)

TT-grouptRNA-intron endonuclease N-terminal domain-like(242.2.1)

FFamilytRNA_int_endo_N(242.2.1.2)

Pfam Families

PF02778tRNA_int_endo_N

tRNA intron endonuclease, N-terminal domain

ClanCL0476tRNA-IECD_N

External Links

ECOD PDB View: 3P1Z RCSB PDB: 3P1Z PDBe: 3P1Z UniProt: Q9YBF1

Downloads

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