ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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P54123_nD3 - ECOD Domain | ECOD

ECOD/Domains/P54123_nD3

P54123_nD3

UID: 004261739

AlphaFold

Range: 456-565
AlphaFold: AF-P54123
UniProt: P54123 (all domains)

3D Structure

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Related Domains

Browse other domains in RNase_J_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupFlagellar protein FlgA N-terminal domain-like(3068)

HH-groupRNase J C-terminal domain(3068.2)

TT-groupRNase J C-terminal domain(3068.2.1)

FFamilyRNase_J_C(3068.2.1.1)

Pfam Families

PF17770RNase_J_C

Ribonuclease J C-terminal domain

External Links

AlphaFold DB: P54123 UniProt: P54123

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 456-565