ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A4VRF3_nD2 - ECOD Domain | ECOD

ECOD/Domains/A4VRF3_nD2

A4VRF3_nD2

UID: 004262678

AlphaFold

Range: 311-390
AlphaFold: AF-A4VRF3
UniProt: A4VRF3 (all domains)
Gene: ligB

Protein: DNA ligase B (EC 6.5.1.2) (Polydeoxyribonucleotide synthase [NAD(+)] B)

3D Structure

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Related Domains

Browse other domains in DNA_ligase_OB →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_OB(2.1.1.26)

Pfam Families

PF03120OB_DNA_ligase

NAD-dependent DNA ligase OB-fold domain

ClanCL0021OB

External Links

AlphaFold DB: A4VRF3 UniProt: A4VRF3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 311-390