ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9HIY5_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9HIY5_nD3

Q9HIY5_nD3

UID: 004263440

AlphaFold

Range: 151-200
AlphaFold: AF-Q9HIY5
UniProt: Q9HIY5 (all domains)
Gene: endA

Protein: tRNA-splicing endonuclease (EC 4.6.1.16) (tRNA-intron endonuclease)

3D Structure

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Related Domains

Browse other domains in EndA_linker →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-grouptRNA-intron endonuclease N-terminal domain-like(242.2)

TT-grouptRNA-intron endonuclease N-terminal domain-like(242.2.1)

FFamilyEndA_linker(242.2.1.4)

Pfam Families

PF22490EndA_linker

tRNA-splicing endonuclease, linker domain

External Links

AlphaFold DB: Q9HIY5 UniProt: Q9HIY5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 151-200