ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A5CFJ6_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5CFJ6_nD1

A5CFJ6_nD1

UID: 004268799

AlphaFold

Range: 6-220
AlphaFold: AF-A5CFJ6
UniProt: A5CFJ6 (all domains)
Gene: mnmA

Protein: tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.13)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA_Me_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA_Me_trans(2005.1.1.23)

Pfam Families

PF03054tRNA_Me_trans

tRNA methyl transferase HUP domain

ClanCL0039HUP

External Links

AlphaFold DB: A5CFJ6 UniProt: A5CFJ6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-220