ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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P17546_nD5 - ECOD Domain | ECOD

ECOD/Domains/P17546_nD5

P17546_nD5

UID: 004275085

AlphaFold

Range: 876-1080
AlphaFold: AF-P17546
UniProt: P17546 (all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_6 →

Classification

AArchitecturea+b complex topology(a.14)

XX-grouphelical domain in yeast RNA-polymerases(4957)

HH-groupthird helical domain in yeast RNA-polymerase II beta-prime subunit(4957.1)

TT-groupthird helical domain in yeast RNA-polymerase II beta-prime subunit(4957.1.1)

FFamilyRNA_pol_Rpb1_6(4957.1.1.1)

Pfam Families

PF04992RNA_pol_Rpb1_6

RNA polymerase Rpb1, domain 6

External Links

AlphaFold DB: P17546 UniProt: P17546

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 876-1080