ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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Q8DM00_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8DM00_nD1

Q8DM00_nD1

UID: 004275255

AlphaFold

Range: 6-95
AlphaFold: AF-Q8DM00
UniProt: Q8DM00 (all domains)

3D Structure

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Related Domains

Browse other domains in PrmA →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupEF-G C-terminal domain-like(304.24)

TT-groupEF-G C-terminal domain-like(304.24.1)

FFamilyPrmA(304.24.1.16)

Pfam Families

Ribosomal protein L11 methyltransferase (PrmA)

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q8DM00 UniProt: Q8DM00

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-95