ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5DCV3_nD6 - ECOD Domain | ECOD

ECOD/Domains/A5DCV3_nD6

A5DCV3_nD6

UID: 004276742

AlphaFold

Range: 946-975,1106-1165
AlphaFold: AF-A5DCV3
UniProt: A5DCV3 (all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupferredoxin-like domain in yeast RNA-polymerase beta-prime subunit(4956)

HH-groupferredoxin-like domain in yeast RNA-polymerase beta-prime subunit(4956.1)

TT-groupferredoxin-like domain in yeast RNA-polymerase beta-prime subunit(4956.1.1)

FFamilyRNA_pol_Rpb1_5(4956.1.1.1)

Pfam Families

PF04998RNA_pol_Rpb1_5

RNA polymerase Rpb1, domain 5

External Links

AlphaFold DB: A5DCV3 UniProt: A5DCV3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 946-975,1106-1165