ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3s4tD1 - ECOD Domain | ECOD

ECOD/Domains/e3s4tD1

e3s4tD1

UID: 000427780

PDB

Range: D:1-324
PDB: 3S4T chain D(all domains)
UniProt: Q12BV1 (all domains)
Gene: Bpro_2061

Molecule: Amidohydrolase 2

3D Structure

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Related Domains

Browse other domains in Amidohydro_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAmidohydro_2(2002.1.1.134)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Acetate, HEPES, Glycerin, …)

AcetateACT
DrugBank DB14511
HEPESEPE
DrugBank DB16872
Glycerin

Pfam Families

PF04909Amidohydro_2

Amidohydrolase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3S4T RCSB PDB: 3S4T PDBe: 3S4T UniProt: Q12BV1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.