ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

C5D8S1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C5D8S1_nD2

C5D8S1_nD2

UID: 004280614

AlphaFold

Range: 61-290
AlphaFold: AF-C5D8S1
UniProt: C5D8S1 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in MMR_HSR1, RsgA_GTPase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMMR_HSR1, RsgA_GTPase(2004.1.1.422)

Pfam Families

PF01926MMR_HSR1

50S ribosome-binding GTPase

ClanCL0023P-loop_NTPase

PF03193RsgA_GTPase

RsgA GTPase

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: C5D8S1 UniProt: C5D8S1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-290