ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yk7A1 - ECOD Domain | ECOD

ECOD/Domains/e2yk7A1

e2yk7A1

UID: 000428392

PDB

Range: A:49-238
PDB: 2YK7 chain A(all domains)
UniProt: P72097 (all domains)
Gene: lst

Molecule: CMP-N-ACETYLNEURAMINATE-BETA-GALACTOSAMIDE-ALPHA-2,3-SIALYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in Glyco_transf_52 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlyco_transf_52(7512.1.1.23)

Ligands

in contact, ≤ 4 Å

CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACIDCSF
within 5 Å only

+ 2 additives (Pentaethylene glycol, 1,2-ETHANEDIOL)

Pentaethylene glycol1PE
1,2-ETHANEDIOLEDO

Pfam Families

PF07922Glyco_transf_52

Glycosyltransferase family 52

ClanCL0113GT-B

External Links

ECOD PDB View: 2YK7 RCSB PDB: 2YK7 PDBe: 2YK7 UniProt: P72097

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.