ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5HKQ1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5HKQ1_nD1

Q5HKQ1_nD1

UID: 004288466

AlphaFold

Range: 1-65
AlphaFold: AF-Q5HKQ1
UniProt: Q5HKQ1 (all domains)
Gene: icaR

Protein: Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR (Intercellular adhesion protein R)

3D Structure

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Related Domains

Browse other domains in TetR_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyTetR_N(101.1.1.5)

Pfam Families

Bacterial regulatory proteins, tetR family

ClanCL0123HTH

External Links

AlphaFold DB: Q5HKQ1 UniProt: Q5HKQ1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-65