ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q87XG5_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q87XG5_nD1

Q87XG5_nD1

UID: 004294537

AlphaFold

Range: 1-319
AlphaFold: AF-Q87XG5
UniProt: Q87XG5 (all domains)
Gene: cmoB

Protein: tRNA U34 carboxymethyltransferase (EC 2.5.1.-)

3D Structure

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Related Domains

Browse other domains in Methyltransf_9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_9(2003.1.5.64)

Pfam Families

PF08003Methyltransf_9

Protein of unknown function (DUF1698)

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q87XG5 UniProt: Q87XG5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-319