ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JEP3_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JEP3_nD1

Q5JEP3_nD1

UID: 004304873

AlphaFold

Range: 6-384
AlphaFold: AF-Q5JEP3
UniProt: Q5JEP3 (all domains)
Gene: trpS

Protein: Tryptophan--tRNA ligase (EC 6.1.1.2) (Tryptophanyl-tRNA synthetase) (TrpRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1b →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1b(2005.1.1.2)

Pfam Families

PF00579tRNA-synt_1b

tRNA synthetases class I (W and Y)

ClanCL0039HUP

External Links

AlphaFold DB: Q5JEP3 UniProt: Q5JEP3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-384