ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q1JQ94_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q1JQ94_nD1

Q1JQ94_nD1

UID: 004308300

AlphaFold

Range: 26-105
AlphaFold: AF-Q1JQ94
UniProt: Q1JQ94 (all domains)

3D Structure

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Related Domains

Browse other domains in DUF4939 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyDUF4939(170.2.1.7)

Pfam Families

PF16297RTL1-8_LDOC

RTL1/3-8/LDOC, capsid-like domain

ClanCL0523GAG-polyprotein

External Links

AlphaFold DB: Q1JQ94 UniProt: Q1JQ94

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-105