ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B6A880_nD2 - ECOD Domain | ECOD

ECOD/Domains/B6A880_nD2

B6A880_nD2

UID: 004312073

AlphaFold

Range: 6-15,21-380,701-1315,1336-1480
AlphaFold: AF-B6A880
UniProt: B6A880 (all domains)
Gene: yenB

Protein: Toxin subunit YenB

3D Structure

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Related Domains

Browse other domains in SpvB,TcdB_toxin_midC,TcdB_toxin_midN →

Classification

AArchitecturebeta meanders(a.2)

XX-groupRearrangement hotspot (RHS) repeats protein(3735)

HH-groupRearrangement hotspot (RHS) repeats protein(3735.1)

TT-groupRearrangement hotspot (RHS) repeats protein(3735.1.1)

FFamilySpvB,TcdB_toxin_midC,TcdB_toxin_midN(3735.1.1.2)

Pfam Families

Salmonella virulence plasmid 65kDa B protein

PF12255TcdB_toxin_midC

Insecticide toxin TcdB middle/C-terminal region

ClanCL0877RHS_sf

PF12256TcdB_toxin_midN

Insecticide toxin TcdB middle/N-terminal region

ClanCL0186Beta_propeller

External Links

AlphaFold DB: B6A880 UniProt: B6A880

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-15,21-380,701-1315,1336-1480