ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8NMF0_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8NMF0_nD3

Q8NMF0_nD3

UID: 004316998

AlphaFold

Range: 171-320,346-355
AlphaFold: AF-Q8NMF0
UniProt: Q8NMF0 (all domains)
Gene: ipsA

Protein: HTH-type transcriptional regulator IpsA

3D Structure

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Related Domains

Browse other domains in Peripla_BP_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_3(2007.1.2.10)

Pfam Families

PF13377Peripla_BP_3

Periplasmic binding protein-like domain

ClanCL0144Periplas_BP

External Links

AlphaFold DB: Q8NMF0 UniProt: Q8NMF0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-320,346-355