ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q4R6F3_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q4R6F3_nD2

Q4R6F3_nD2

UID: 004318583

AlphaFold

Range: 166-245,261-445
AlphaFold: AF-Q4R6F3
UniProt: Q4R6F3 (all domains)
Gene: NGLY1

Protein: Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (PNGase) (EC 3.5.1.52) (N-glycanase 1) (Peptide:N-glycanase)

3D Structure

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Related Domains

Browse other domains in Transglut_core, Rad4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyTransglut_core, Rad4(219.1.1.111)

Pfam Families

PF01841Transglut_core

Transglutaminase-like superfamily

ClanCL0125Peptidase_CA

Rad4 transglutaminase-like domain

ClanCL0125Peptidase_CA

External Links

AlphaFold DB: Q4R6F3 UniProt: Q4R6F3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 166-245,261-445