ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9KN42_nD8 - ECOD Domain | ECOD

ECOD/Domains/Q9KN42_nD8

Q9KN42_nD8

UID: 004319402

AlphaFold

Range: 816-1015
AlphaFold: AF-Q9KN42
UniProt: Q9KN42 (all domains)
Gene: vgrG3

Protein: Type VI secretion system spike protein VgrG3 (Muramidase Vgrg3C) (EC 3.2.1.-)

3D Structure

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Related Domains

Browse other domains in T6SS_VgrG3-like_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyT6SS_VgrG3-like_C(235.1.1.25)

Pfam Families

PF21277T6SS_VgrG3-like_C

Type VI secretion system spike protein VgrG3-like, C-terminal

ClanCL0037Lysozyme

External Links

AlphaFold DB: Q9KN42 UniProt: Q9KN42

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 816-1015