ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O28028_nD2 - ECOD Domain | ECOD

ECOD/Domains/O28028_nD2

O28028_nD2

UID: 004323653

AlphaFold

Range: 1-40,121-249
AlphaFold: AF-O28028
UniProt: O28028 (all domains)
Gene: cofE

Protein: Coenzyme F420:L-glutamate ligase (EC 6.3.2.31) (EC 6.3.2.34) (Coenzyme F420-0:L-glutamate ligase) (Coenzyme F420-1:gamma-L-glutamate ligase) (F420:glutamyl ligase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in F420_ligase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCofE-like(4093)

HH-groupCofE-like(4093.1)

TT-groupCofE-like(4093.1.1)

FFamilyF420_ligase(4093.1.1.1)

Pfam Families

PF01996F420_ligase

F420-0:Gamma-glutamyl ligase

External Links

AlphaFold DB: O28028 UniProt: O28028

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-40,121-249