ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JJE8_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5JJE8_nD2

Q5JJE8_nD2

UID: 004325352

AlphaFold

Range: 246-338
AlphaFold: AF-Q5JJE8
UniProt: Q5JJE8 (all domains)
Gene: truB

Protein: Probable tRNA pseudouridine synthase B (EC 5.4.99.25) (tRNA pseudouridine(55) synthase) (Psi55 synthase) (tRNA pseudouridylate synthase) (tRNA-uridine isomerase)

3D Structure

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Related Domains

Browse other domains in PUA →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyPUA(1.1.9.1)

Pfam Families

PUA domain

ClanCL0178PUA

External Links

AlphaFold DB: Q5JJE8 UniProt: Q5JJE8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-338