ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6LYM1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q6LYM1_nD4

Q6LYM1_nD4

UID: 004329856

AlphaFold

Range: 441-573
AlphaFold: AF-Q6LYM1
UniProt: Q6LYM1 (all domains)
Gene: lig

Protein: DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase [ATP])

3D Structure

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Related Domains

Browse other domains in DNA_ligase_A_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_ligase_A_C(2.1.1.31)

Pfam Families

PF04679DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

ClanCL0021OB

External Links

AlphaFold DB: Q6LYM1 UniProt: Q6LYM1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 441-573