ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8U1S9_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8U1S9_nD1

Q8U1S9_nD1

UID: 004331132

AlphaFold

Range: 1-290
AlphaFold: AF-Q8U1S9
UniProt: Q8U1S9 (all domains)
Gene: cmr4

Protein: CRISPR system Cmr endoribonuclease Cmr4 (EC 3.1.-.-) (CRISPR type III-B/RAMP module RAMP protein Cmr4) (Target RNase Cmr4)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RAMPs →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCas7-related(304.139)

TT-groupCRISPR-associated protein Cas7/Csa2-related(304.139.1)

FFamilyRAMPs(304.139.1.2)

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

AlphaFold DB: Q8U1S9 UniProt: Q8U1S9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-290