ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8U4F3_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8U4F3_nD2

Q8U4F3_nD2

UID: 004335484

AlphaFold

Range: 291-523
AlphaFold: AF-Q8U4F3
UniProt: Q8U4F3 (all domains)
Gene: lysS

Protein: Lysine--tRNA ligase (EC 6.1.1.6) (Lysyl-tRNA synthetase) (LysRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1f,Anticodon_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupAn anticodon-binding domain of class I aminoacyl-tRNA synthetases(101.8)

TT-groupAn anticodon-binding domain of class I aminoacyl-tRNA synthetases(101.8.1)

FFamilytRNA-synt_1f,Anticodon_2(101.8.1.1)

Pfam Families

PF01921tRNA-synt_1f

tRNA synthetases class I (K)

ClanCL0039HUP

PF19269Anticodon_2

Anticodon binding domain

External Links

AlphaFold DB: Q8U4F3 UniProt: Q8U4F3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 291-523