ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B5EMS4_nD1 - ECOD Domain | ECOD

ECOD/Domains/B5EMS4_nD1

B5EMS4_nD1

UID: 004337698

AlphaFold

Range: 6-65,71-120,126-230
AlphaFold: AF-B5EMS4
UniProt: B5EMS4 (all domains)

3D Structure

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Related Domains

Browse other domains in tRNA_synt_2f →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20)

TT-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20.1)

FFamilytRNA_synt_2f(304.20.1.5)

Pfam Families

PF02092tRNA_synt_2f

Glycyl-tRNA synthetase beta subunit

External Links

AlphaFold DB: B5EMS4 UniProt: B5EMS4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-65,71-120,126-230