ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5FJK6_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5FJK6_nD1

Q5FJK6_nD1

UID: 004339792

AlphaFold

Range: 1-85
AlphaFold: AF-Q5FJK6
UniProt: Q5FJK6 (all domains)
Gene: rimM

Protein: Ribosome maturation factor RimM

3D Structure

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Related Domains

Browse other domains in RimM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyRimM(1.1.7.11)

Pfam Families

RimM N-terminal domain

ClanCL0866ALR_C-like

External Links

AlphaFold DB: Q5FJK6 UniProt: Q5FJK6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-85