ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5ZK88_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5ZK88_nD1

Q5ZK88_nD1

UID: 004341810

AlphaFold

Range: 76-260
AlphaFold: AF-Q5ZK88
UniProt: Q5ZK88 (all domains)

3D Structure

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Related Domains

Browse other domains in RRM_1,NOPS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1,NOPS(304.9.1.3)

Pfam Families

RNA recognition motif

ClanCL0221RRM

NOPS (NUC059) domain

External Links

AlphaFold DB: Q5ZK88 UniProt: Q5ZK88

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-260