ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5ATV8_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5ATV8_nD2

Q5ATV8_nD2

UID: 004342476

AlphaFold

Range: 301-380,411-450
AlphaFold: AF-Q5ATV8
UniProt: Q5ATV8 (all domains)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpc82 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRNA_pol_Rpc82(101.1.2.73)

Pfam Families

PF05645RNA_pol_Rpc82

RNA polymerase III subunit RPC82

ClanCL0123HTH

External Links

AlphaFold DB: Q5ATV8 UniProt: Q5ATV8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 301-380,411-450