ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q6C4F8_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6C4F8_nD2

Q6C4F8_nD2

UID: 004344859

AlphaFold

Range: 86-115
AlphaFold: AF-Q6C4F8
UniProt: Q6C4F8 (all domains)
Gene: TRM13

Protein: tRNA:m(4)X modification enzyme TRM13 (EC 2.1.1.225) (tRNA methylase 13)

3D Structure

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Related Domains

Browse other domains in zf-U11-48K →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-U11-48K(386.1.1.7)

Pfam Families

PF05253zf-U11-48K

U11-48K-like CHHC zinc finger

ClanCL0361C2H2-zf

External Links

AlphaFold DB: Q6C4F8 UniProt: Q6C4F8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-115