ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q8NJK6_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8NJK6_nD1

Q8NJK6_nD1

UID: 004352016

AlphaFold

Range: 21-385
AlphaFold: AF-Q8NJK6
UniProt: Q8NJK6 (all domains)

3D Structure

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Related Domains

Browse other domains in Pectate_lyase_4 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectate_lyase_4(207.2.1.3)

Pfam Families

PF00544Pectate_lyase_4

Pectate lyase

ClanCL0268Pec_lyase-like

External Links

AlphaFold DB: Q8NJK6 UniProt: Q8NJK6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-385