ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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E1QU22_nD1 - ECOD Domain | ECOD

ECOD/Domains/E1QU22_nD1

E1QU22_nD1

UID: 004355963

AlphaFold

Range: 1-180
AlphaFold: AF-E1QU22
UniProt: E1QU22 (all domains)
Gene: Vdis_0418

Protein: 16S rRNA aminocarboxypropyltransferase (EC 2.5.1.157) (20S S rRNA accumulation protein 3 homolog) (VdTsr3)

3D Structure

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Related Domains

Browse other domains in Ribo_biogen_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyRibo_biogen_C(2488.1.1.9)

Pfam Families

PF04034Ribo_biogen_C

Ribosome biogenesis protein, C-terminal

ClanCL0098SPOUT

External Links

AlphaFold DB: E1QU22 UniProt: E1QU22

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-180