ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q16BC9_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q16BC9_nD1

Q16BC9_nD1

UID: 004357016

AlphaFold

Range: 31-325
AlphaFold: AF-Q16BC9
UniProt: Q16BC9 (all domains)
Gene: RD1_1052

Protein: Solute-binding protein RD1_1052

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDctP(7523.1.1.16)

Pfam Families

Bacterial extracellular solute-binding protein, family 7

ClanCL0177PBP

External Links

AlphaFold DB: Q16BC9 UniProt: Q16BC9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-325