ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q89M63_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q89M63_nD2

Q89M63_nD2

UID: 004358957

AlphaFold

Range: 336-415
AlphaFold: AF-Q89M63
UniProt: Q89M63 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SYY_C-terminal →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilySYY_C-terminal(221.1.2.10)

Pfam Families

PF22421SYY_C-terminal

Tyrosine--tRNA ligase SYY-like C-terminal domain

ClanCL0492S4

External Links

AlphaFold DB: Q89M63 UniProt: Q89M63

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 336-415