ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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P39796_nD1 - ECOD Domain | ECOD

ECOD/Domains/P39796_nD1

P39796_nD1

UID: 004363065

AlphaFold

Range: 6-70
AlphaFold: AF-P39796
UniProt: P39796 (all domains)
Gene: treR

Protein: HTH-type transcriptional regulator TreR (Trehalose operon repressor)

3D Structure

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Related Domains

Browse other domains in GntR →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyGntR(101.1.2.6)

Pfam Families

Bacterial regulatory proteins, gntR family

ClanCL0123HTH

External Links

AlphaFold DB: P39796 UniProt: P39796

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-70