ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5SHZ3_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5SHZ3_nD2

Q5SHZ3_nD2

UID: 004368017

AlphaFold

Range: 111-319
AlphaFold: AF-Q5SHZ3
UniProt: Q5SHZ3 (all domains)
Gene: ddl

Protein: D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)

3D Structure

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Related Domains

Browse other domains in Dala_Dala_lig_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyDala_Dala_lig_C(206.1.3.19)

Pfam Families

PF07478Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

ClanCL0179ATP-grasp

External Links

AlphaFold DB: Q5SHZ3 UniProt: Q5SHZ3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 111-319