ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5SKD2_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5SKD2_nD1

Q5SKD2_nD1

UID: 004368026

AlphaFold

Range: 1-105
AlphaFold: AF-Q5SKD2
UniProt: Q5SKD2 (all domains)
Gene: aspS1

Protein: Aspartate--tRNA(Asp) ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase 1) (AspRS1) (Discriminating aspartyl-tRNA synthetase) (D-AspRS)

3D Structure

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Related Domains

Browse other domains in tRNA_anti-codon →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilytRNA_anti-codon(2.1.1.15)

Pfam Families

PF01336tRNA_anti-codon

OB-fold nucleic acid binding domain

ClanCL0021OB

External Links

AlphaFold DB: Q5SKD2 UniProt: Q5SKD2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-105