ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B0FYY4_nD1 - ECOD Domain | ECOD

ECOD/Domains/B0FYY4_nD1

B0FYY4_nD1

UID: 004375560

AlphaFold

Range: 28-85
AlphaFold: AF-B0FYY4
UniProt: B0FYY4 (all domains)
Gene: ITGB1

Protein: Integrin beta-1 (Fibronectin receptor subunit beta) (Integrin subunit beta-1) (VLA-4 subunit beta) (CD antigen CD29)

3D Structure

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Related Domains

Browse other domains in PSI_integrin →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupTrefoil/Plexin domain-like(355)

HH-groupTrefoil/Plexin domain-like(355.1)

TT-groupTrefoil/Plexin domain-like(355.1.1)

FFamilyPSI_integrin(355.1.1.5)

Pfam Families

PF17205PSI_integrin

Integrin plexin domain

ClanCL0630PSI

External Links

AlphaFold DB: B0FYY4 UniProt: B0FYY4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 28-85