ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B1L8F3_nD1 - ECOD Domain | ECOD

ECOD/Domains/B1L8F3_nD1

B1L8F3_nD1

UID: 004375574

AlphaFold

Range: 1-140
AlphaFold: AF-B1L8F3
UniProt: B1L8F3 (all domains)
Gene: miaB

Protein: tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC 2.8.4.3) ((Dimethylallyl)adenosine tRNA methylthiotransferase MiaB) (tRNA-i(6)A37 methylthiotransferase)

3D Structure

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Related Domains

Browse other domains in UPF0004 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyUPF0004(2007.1.3.2)

Pfam Families

PF00919UPF0004

Uncharacterized protein family UPF0004

ClanCL0304CheY

External Links

AlphaFold DB: B1L8F3 UniProt: B1L8F3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-140