ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1if0C1 - ECOD Domain | ECOD

ECOD/Domains/e1if0C1

e1if0C1

UID: 000437589

PDB

Range: C:128-383
PDB: 1IF0 chain C(all domains)
UniProt: P49861 (all domains)
Gene: 5

Molecule: Major capsid protein (Gene product 5) (gp5) (Major head protein) [Cleaved into: Scaffolding domain delta]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Phage_capsid →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupMajor capsid protein gp5(2485.3)

TT-groupMajor capsid protein gp5(2485.3.1)

FFamilyPhage_capsid(2485.3.1.3)

Pfam Families

PF05065Phage_capsid

Phage capsid family

ClanCL0373Phage-coat

External Links

ECOD PDB View: 1IF0 RCSB PDB: 1IF0 PDBe: 1IF0 UniProt: P49861

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure