ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8U1S6_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q8U1S6_nD4

Q8U1S6_nD4

UID: 004376170

AlphaFold

Range: 786-870
AlphaFold: AF-Q8U1S6
UniProt: Q8U1S6 (all domains)
Gene: cmr2

Protein: CRISPR system Cmr subunit Cmr2 (CRISPR-associated protein Cas10/Cmr2, subtype III-B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cmr2_hel_dom2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupCRISPR RNA silencing complex Cmr2 subunit second helical domain(3625)

HH-groupCRISPR RNA silencing complex Cmr2 subunit second helical domain(3625.1)

TT-groupCRISPR RNA silencing complex Cmr2 subunit second helical domain(3625.1.1)

FFamilyCmr2_hel_dom2(3625.1.1.1)

Pfam Families

PF20824Cmr2_hel_dom2

CRISPR RNA silencing complex Cmr2 subunit, second helical domain

External Links

AlphaFold DB: Q8U1S6 UniProt: Q8U1S6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 786-870