ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

C3MPN7_nD3 - ECOD Domain | ECOD

ECOD/Domains/C3MPN7_nD3

C3MPN7_nD3

UID: 004380313

AlphaFold

Range: 306-525
AlphaFold: AF-C3MPN7
UniProt: C3MPN7 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Topo-VIb_trans →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyTopo-VIb_trans(212.1.1.22)

Pfam Families

PF09239Topo-VIb_trans

Topoisomerase VI B subunit, transducer

ClanCL0329S5

External Links

AlphaFold DB: C3MPN7 UniProt: C3MPN7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 306-525