ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5FKH3_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5FKH3_nD1

Q5FKH3_nD1

UID: 004380429

AlphaFold

Range: 1-310
AlphaFold: AF-Q5FKH3
UniProt: Q5FKH3 (all domains)
Gene: rnz

Protein: Ribonuclease Z (RNase Z) (EC 3.1.26.11) (tRNA 3 endonuclease) (tRNase Z)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Anti-Pycsar_Apyc1 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyAnti-Pycsar_Apyc1(247.1.1.30)

Pfam Families

PF23023Anti-Pycsar_Apyc1

Anti-Pycsar protein Apyc1

ClanCL0381Metallo-HOrase

External Links

AlphaFold DB: Q5FKH3 UniProt: Q5FKH3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-310