ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5YSE0_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5YSE0_nD2

Q5YSE0_nD2

UID: 004385805

AlphaFold

Range: 246-305
AlphaFold: AF-Q5YSE0
UniProt: Q5YSE0 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TruB_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPUA domain(1.1.9)

FFamilyTruB_C(1.1.9.10)

Pfam Families

tRNA Pseudouridine synthase II, C terminal

ClanCL0178PUA

External Links

AlphaFold DB: Q5YSE0 UniProt: Q5YSE0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-305