ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54HG9_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q54HG9_nD4

Q54HG9_nD4

UID: 004393970

RepresentativeAlphaFold

Range: 571-680
AlphaFold: AF-Q54HG9
UniProt: Q54HG9 (all domains)
Gene: swp1

Protein: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit swp1 (Oligosaccharyl transferase subunit swp1) (Ribophorin II) (RPN-II) (Ribophorin-2)

3D Structure

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Related Domains

Browse other domains in Ribophorin_II_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-groupEndosomal sorting complex assembly domains(192.15)

TT-groupEndosomal sorting complex assembly domains(192.15.1)

FFamilyRibophorin_II_C(192.15.1.46)

Pfam Families

PF25147Ribophorin_II_C

Ribophorin_II, C-terminal domain

External Links

AlphaFold DB: Q54HG9 UniProt: Q54HG9

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 571-680