ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q6GPJ4_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6GPJ4_nD2

Q6GPJ4_nD2

UID: 004394422

AlphaFold

Range: 186-285,336-419
AlphaFold: AF-Q6GPJ4
UniProt: Q6GPJ4 (all domains)

3D Structure

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Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

AlphaFold DB: Q6GPJ4 UniProt: Q6GPJ4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-285,336-419