ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5VFM5_nD1 - ECOD Domain | ECOD

ECOD/Domains/A5VFM5_nD1

A5VFM5_nD1

UID: 004394772

AlphaFold

Range: 6-200
AlphaFold: AF-A5VFM5
UniProt: A5VFM5 (all domains)
Gene: pdxH

Protein: Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase)

3D Structure

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Related Domains

Browse other domains in Putative_PNPOx,PNP_phzG_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPutative_PNPOx,PNP_phzG_C(1.1.5.9)

Pfam Families

PF01243PNPOx_N

Pyridoxamine 5'-phosphate oxidase

ClanCL0336FMN-binding

PF10590PNP_phzG_C

Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

External Links

AlphaFold DB: A5VFM5 UniProt: A5VFM5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-200