ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5SKD2_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5SKD2_nD2

Q5SKD2_nD2

UID: 004397877

AlphaFold

Range: 126-295,416-575
AlphaFold: AF-Q5SKD2
UniProt: Q5SKD2 (all domains)
Gene: aspS1

Protein: Aspartate--tRNA(Asp) ligase (EC 6.1.1.12) (Aspartyl-tRNA synthetase 1) (AspRS1) (Discriminating aspartyl-tRNA synthetase) (D-AspRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2(314.1.1.1)

Pfam Families

PF00152tRNA-synt_2

tRNA synthetases class II (D, K and N)

ClanCL0040tRNA_synt_II

External Links

AlphaFold DB: Q5SKD2 UniProt: Q5SKD2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 126-295,416-575