ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5R8F7_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5R8F7_nD2

Q5R8F7_nD2

UID: 004398807

AlphaFold

Range: 96-180
AlphaFold: AF-Q5R8F7
UniProt: Q5R8F7 (all domains)
Gene: PABPC1

Protein: Polyadenylate-binding protein 1 (PABP-1) (Poly(A)-binding protein 1)

3D Structure

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Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q5R8F7 UniProt: Q5R8F7

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-180